The best replacement for cilia is microvilli.

The best alternatives to cilia are rated as following:
★★★★★  microvilli
★★★★  flagella
★★★  villi
★★★  flagella function
★★  pili
★★  cilia
★★  flagellum
★  stereocilia
★  microvilli histology
★  flagella and microvilli
★  cilium
★  flagella faster
  microvillus

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