The best replacement for chlorhexidine is betadine.

The best alternatives to chlorhexidine are rated as following:
★★★★★  betadine
★★★  povidone iodine
★★★  alcohol
★★★  listerine
★★  iodine
★  alcohol wipes
★  hibiclens
★  closys
  hexetidine
  povidone
  hexachlorophene
  chloraprep
  pcmx
  chloroxylenol
  benzydamine
  sodium hypochlorite
  cetylpyridinium chloride
  beta dine
  triclosan

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Google Trends

Scale is based on the average worldwide traffic of chlorhexidine in all years. Click on graph for more.
chlorhexidine
betadine
povidone iodine