The best replacement for autoimmune is immune.

The best alternatives to autoimmune are rated as following:
★★★★★  immune
★★★★  immune deficiency
★★★★  allergy
★★★  immune mediated
★★  autoimmune
★★  immunodeficiency
★★  alloimmune
★  acquired immune
★  autoinflammatory
  isoimmune

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No companions for autoimmune have been suggested so far.
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autoimmune
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