The best replacement for greninja is chesnaught.

The best alternatives to greninja are rated as following:
★★★★★  chesnaught
★★★★  blastoise
★★★  starmie
★★★  infernape
★★★  samurott
★★  blaziken
★★  talonflame
★★  sceptile
★★  empoleon
★★  vaporeon
★★  gengar
★  feraligatr
★  toxicroak
★  lucario
★  lapras
★  milotic
  swampert
  delphox

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greninja
chesnaught
blastoise