The best replacement for systems engineering is software engineering.

The best alternatives to systems engineering are rated as following:
★★★★★  software engineering
★★★★  industrial engineering
★★★★  project management
★★★★  engineering management
★  operations research
★  mechatronics
★  program management
  system engineering
  systems thinking
  enterprise architecture
  traditional engineering

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Google Trends

Scale is based on the average worldwide traffic of systems engineering in all years. Click on graph for more.
systems engineering
software engineering
industrial engineering