The best replacement for autogk is handbrake.

The best alternatives to autogk are rated as following:
★★★★★  handbrake
★★★  megui
★★  gordian knot
★★  avi net
★★  virtualdub
★★  avi.net
★★  fairuse wizard
★  fairuse
★  automkv
★  staxrip

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Google Trends

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autogk
handbrake
megui