The best replacement for agarose is polyacrylamide.

The best alternatives to agarose are rated as following:
★★★★★  polyacrylamide
★★★★★  agar
★★★★  acrylamide
★★  polyacrylamide gels
★★  polyacrylamide gel
★★  sds page
★★  polyacrylamide gel electrophoresis
★★  sepharose
★  polyacrylamide electrophoresis
★  acrylamide gel electrophoresis
  page
  poly acrylamide
  agarose
  acrylamide gel
  acrylamide gels
  polyacrylamid

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