The best replacement for aerodactyl is pidgeot.

The best alternatives to aerodactyl are rated as following:
★★★★★  pidgeot
★★★★★  kabutops
★★★★  archeops
★★★★  dragonite
★★★  dodrio
★★  talonflame
★★  tyrantrum
★★  skarmory
★★  noivern
★★  charizard
★  crobat
★  zapdos
★  tyranitar
★  tyrunt
★  kabutops fire red
★  flygon
★  nidoking
★  tyrant
★  rhydon
★  hawlucha
★  togekiss
★  pidgeot fire red
  kabuto
  omanyte
  rampardos
  articuno
  staraptor
  fearow

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Google Trends

Scale is based on the average worldwide traffic of aerodactyl in all years. Click on graph for more.
aerodactyl
pidgeot
kabutops