The best replacement for setcpu is cpu tuner.

The best alternatives to setcpu are rated as following:
★★★★★  cpu tuner
★★★★  no frills
★★★  cpu master
★★★  no frills cpu control
★★★  trickster mod
★★★  antutu
★★★  antutu cpu master
★★★  rom toolbox
★★  tegrak
★★  voltage control
★  system tuner
★  droid overclock
★  android overclock
★  tegrak overclock
  overclock
  overclock widget

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setcpu
cpu tuner
no frills