The best replacement for mkl is openblas.

The best alternatives to mkl are rated as following:
★★★★★  openblas
★★★★★  atlas
★★★★  acml
★★★  imsl
★★★  gsl
★★★  gotoblas
★★  fftw
★  ipp
★  lapack
  eigen

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mkl
openblas
atlas