The best replacement for iso 9001 is iso 14001.

The best alternatives to iso 9001 are rated as following:
★★★★★  iso 14001
★★★★★  as9100
★★★★  iso 13485
★★★★  9002
★★★★  six sigma
★★★★  iso 9002
★★★  cmmi
★★  ts16949
★★  9000
★★  27001
★  gmp
★  iso9001
★  17025
★  13485
★  nqa-1
★  nqa 1
★  cmm
★  api q2
★  iso 17025
★  ts 16949
★  cgmp
  iso 9000
  iso 22000
  14001
  qs 9000
  baldrige
  iso 20000
  as 9100
  as9003
  9004

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iso 9001
iso 14001
as9100